La Trobe

Data set for a comprehensive tutorial on the SOM-RPM toolbox for MATLAB

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Version 2 2024-08-22, 08:14
Version 1 2024-04-24, 01:24
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posted on 2024-08-22, 08:14 authored by Sarah BamfordSarah Bamford, Wil GardnerWil Gardner, Paul PigramPaul Pigram, Ben Muir, David WinklerDavid Winkler, Davide Ballabio

This data set is uploaded as supporting information for the publication entitled:

A Comprehensive Tutorial on the SOM-RPM Toolbox for MATLAB


The attached file 'case_study' includes the following:

X : Data from a ToF-SIMS hyperspectral image. A stage raster containing 960 x800 pixels with 963 associated m/z peaks.

pk_lbls: The m/z label for each of the 963 m/z peaks.

mdl and mdl_masked: SOM-RPM models created using the SOM-RPM tutorial provided within the cited article.

Additional details about the datasets can be found in the published article.

V2 - contains modified peak lists to show intensity weighted m/z rather than peak midpoint.

If you use this data set in your work, please cite our work as follows:

[LINK TO BE ADDED TO PAPER ONCE DOI RECEIVED]

Funding

Office of Intelligence - National Intelligence and Security Discovery Research Grant (NI210100127)

This work was performed in part at the Australian National Fabrication Facility (ANFF), a company established under the National Collaborative Research Infrastructure Strategy, through the La Trobe University Centre for Materials and Surface Science.

History

First created date

2024-04-22

School

  • School of Computing, Engineering and Mathematical Sciences

Publication Date

2024-04-24

Rights Statement

© The Authors 2024. This manuscript version is made available under the CC-BY-NC-SA 4.0 license:https://creativecommons.org/licenses/by-nc-sa/4.0/. This license lets others remix, adapt, and build upon your work non-commercially, as long as they credit you and license their new creations under the identical terms.