La Trobe

The formation of the 'footprint of death' as a mechanism for generating large substrate-bound extracellular vesicles that mark the site of cell death.

Apoptotic cells communicate to phagocytic cells through releasing soluble factors and apoptotic cell-derived extracellular vesicles. However, whether there are additional factors that remain attached at the site of cell death to signal to phagocytic cells is currently unknown. Here we show that apoptotic cell retraction generates a membrane-encased, F-actin-rich ‘footprint’ tightly anchored to the substrate that marks the site of cell death, coined ‘the FOotprint Of Death’ or FOOD. Formation of FOOD is observed frequently across many different cell types, apoptotic stimuli and surface composition. Mechanistically, FOOD formation is regulated by the protein kinase ROCK1. 3D time-lapse microscopy studies revealed that FOOD vesicularises into distinct large extracellular vesicles. These extracellular vesicles expose the ‘eat-me’ signal phosphatidylserine and can function to ‘flag’ the site of cell death to neighbouring phagocytes for efferocytosis. Under a viral infection setting, FOOD can harbour viral proteins and virions, and propagate infection to healthy cells. Together, this study has revealed another route of apoptotic cell-phagocyte communication.<p></p>

Funding

Department of Health | National Health and Medical Research Council (NHMRC) | 1140187

Department of Education and Training | Australian Research Council (ARC) | 230101056

Department of Education and Training | Australian Research Council (ARC) | 210102658

This work was supported by a La Trobe University Postgraduate scholarship to S.F.R., the National Health and Medical Research Council (2009287 to GAS, 1140187 to IP), Australian Research Council (230101056 and 210102658 to IP), Jack Brockhoff Foundation (4852 to GAS) and L’Oreal UNESCO For Women in Science (to GAS).

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History

Publication Date

2025-10-15

Journal

Nature Communications

Volume

16

Issue

1

Article Number

9160

Pagination

15p.

Publisher

Springer Nature

ISSN

2041-1723

Rights Statement

© The Author(s) 2025. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit: http://creativecommons.org/ licenses/by/4.0/.

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