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Structural basis of dimerization and nucleic acid binding of human DBHS proteins NONO and PSPC1

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journal contribution
posted on 2022-01-31, 05:51 authored by Gavin J Knott, Yee Seng Chong, Daniel M Passon, Xue-Hai Liang, Evelyne Deplazes, Maria R Conte, Andrew C Marshall, Mihwa LeeMihwa Lee, Archa H Fox, Charles S Bond
The Drosophila behaviour/human splicing (DBHS) proteins are a family of RNA/DNA binding cofactors liable for a range of cellular processes. DBHS proteins include the non-POU domain-containing octamer-binding protein (NONO) and paraspeckle protein component 1 (PSPC1), proteins capable of forming combinatorial dimers. Here, we describe the crystal structures of the human NONO and PSPC1 homodimers, representing uncharacterized DBHS dimerization states. The structures reveal a set of conserved contacts and structural plasticity within the dimerization interface that provide a rationale for dimer selectivity between DBHS paralogues. In addition, solution X-ray scattering and accompanying biochemical experiments describe a mechanism of cooperative RNA recognition by the NONO homodimer. Nucleic acid binding is reliant on RRM1, and appears to be affected by the orientation of RRM1, influenced by a newly identified 'β-clasp' structure. Our structures shed light on the molecular determinants for DBHS homo- and heterodimerization and provide a basis for understanding how DBHS proteins cooperatively recognize a broad spectrum of RNA targets.

Funding

National Health and Medical Research Council [APP1147496]; Australian Research Council [DP160102435, LE120100092, LE140100096 and FT180100204].

History

Publication Date

2022-01-11

Journal

Nucleic Acids Res

Volume

50

Issue

1

Pagination

(p. 522-535)

Publisher

Oxford University Press

ISSN

0305-1048

Rights Statement

© The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.